XWuet al/Water Researc 165(2)114979 .F.Peak,N.Hanfelt,M.M G. Stewart.PS_ Techno.482011863-187元 onse of biofilm bacteria 1.324 ived organic d w ho,AA.M 792以.619-630 tic-rest y e We 三的w LP. nande2-M al rele ing.H.C.2011.Biotilms in drinking water and their role as Xin X-F Kvitk B.He.S.Y.2 ing what it takes to be a de a yam ra.Y DH. E.R.M 25 om Haihe River and Haihe Estuary Area ohere 78 (10 Bru,D. Zhu. Y-G.. improve genome assemblies. Bioinformatics 27 (21), 2957e2963. Marti, E., Huerta, B., Rodriguez-Mozaz, S., Barcelo, D., Marce, R., Luis Balcazar, J., 2018. Abundance of antibiotic resistance genes and bacterial community composition in wild freshwater fish species. Chemosphere 196, 115e119. Martinez, J.L., Coque, T.M., Baquero, F., 2015. What is a resistance gene? Ranking risk in resistomes. Nat. Rev. Microbiol. 13 (2), 116e123. Maso, M., Garces, E., Pages, F., Camp, J., 2003. Drifting plastic debris as a potential vector for dispersing Harmful Algal Bloom (HAB) species. Sci. Mar. 67 (1), 107e111. McArthur, J.V., Marzolf, G.R., Urban, J.E., 1985. Response of bacteria isolated from a pristine prairie stream to concentration and source of soluble organic carbon. Appl. Environ. Microbiol. 49 (1), 238e241. McCormick, A., Hoellein, T.J., Mason, S.A., Schluep, J., Kelly, J.J., 2014. Microplastic is an abundant and distinct microbial habitat in an urban river. Environ. Sci. Technol. 48 (20), 11863e11871. McNamara, C.J., Leff, L.G., 2004. Response of biofilm bacteria to dissolved organic matter from decomposing maple leaves. Microb. Ecol. 48 (3), 324e330. Mert, A., Yilmaz, M., Ozaras, R., Kocak, F., Dagsali, S., 2007. Native valve endocarditis due to Pseudomonas mendocina in a patient with mental retardation and a review of literature. Scand. J. Infect. Dis. 39 (6e7), 615e616. Miao, L.Z., Wang, P.F., Hou, J., Yao, Y., Liu, Z.L., Liu, S.Q., Li, T.F., 2019. Distinct com￾munity structure and microbial functions of biofilms colonizing microplastics. Sci. Total Environ. 650, 2395e2402. Newman, M.E.J., 2006. Modularity and community structure in networks. Proc. Natl. Acad. Sci. U. S. A 103 (23), 8577e8582. Oberbeckmann, S., Loeder, M.G.J., Gerdts, G., Osborn, A.M., 2014. Spatial and sea￾sonal variation in diversity and structure of microbial biofilms on marine plastics in Northern European waters. FEMS Microbiol. Ecol. 90 (2), 478e492. Ocampo-Sosa, A.A., Guzman-Gomez, L.P., Fernandez-Martinez, M., Roman, E., Rodriguez, C., Marco, F., Vila, J., Martinez-Martinez, L., 2015. Isolation of VIM-2- producing Pseudomonas monteilii clinical strains disseminated in a tertiary hospital in Northern Spain. Antimicrob. Agents Chemother. 59 (2), 1334e1336. Ogonowski, M., Motiei, A., Ininbergs, K., Hell, E., Gerdes, Z., Udekwu, K.I., Bacsik, Z., Gorokhova, E., 2018. Evidence for selective bacterial community structuring on microplastics. Environ. Microbiol. 20 (8), 2796e2808. Ostrowski, A., Mehert, A., Prescott, A., Kiley, T.B., Stanley-Wall, N.R., 2011. YuaB functions synergistically with the exopolysaccharide and TasA amyloid fibers to allow biofilm formation by Bacillus subtilis. J. Bacteriol. 193 (18), 4821e4831. Parks, D.H., Rinke, C., Chuvochina, M., Chaumeil, P.-A., Woodcroft, B.J., Evans, P.N., Hugenholtz, P., Tyson, G.W., 2017. Recovery of nearly 8,000 metagenome￾assembled genomes substantially expands the tree of life. Nat. Microbiol. 2 (11), 1533e1542. Peng, Y., Leung, H.C.M., Yiu, S.M., Chin, F.Y.L., 2012. IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics 28 (11), 1420e1428. Philippot, L., Spor, A., Henault, C., Bru, D., Bizouard, F., Jones, C.M., Sarr, A., Maron, P.- A., 2013. Loss in microbial diversity affects nitrogen cycling in soil. ISME J. 7 (8), 1609e1619. Rachman, C.M., 2018. Microplastics research - from sink to source. Science 360 (6384), 28e29. Schluter, J., Nadell, C.D., Bassler, B.L., Foster, K.R., 2015. Adhesion as a weapon in microbial competition. ISME J. 9 (1), 139e149. Siboni, N., Lidor, M., Kramarsky-Winter, E., Kushmaro, A., 2007. Conditioning film and initial biofilm formation on ceramics tiles in the marine environment. FEMS Microbiol. Lett. 274 (1), 24e29. Smith, M.S., Yang, R.K., Knapp, C.W., Niu, Y.F., Peak, N., Hanfelt, M.M., Galland, J.C., Graham, D.W., 2004. Quantification of tetracycline resistance genes in feedlot lagoons by real-time PCR. Appl. Environ. Microbiol. 70 (12), 7372e7377. Sorensen, S.J., Bailey, M., Hansen, L.H., Kroer, N., Wuertz, S., 2005. Studying plasmid horizontal transfer in situ: a critical review. Nat. Rev. Microbiol. 3 (9), 700e710. Stewart, P.S., Costerton, J.W., 2001. Antibiotic resistance of bacteria in biofilms. Lancet 358 (9276), 135e138. Stokes, H.W., Gillings, M.R., 2011. Gene flow, mobile genetic elements and the recruitment of antibiotic resistance genes into Gram-negative pathogens. FEMS Microbiol. Rev. 35 (5), 790e819. Su, L., Xue, Y.G., Li, L.Y., Yang, D.Q., Kolandhasamy, P., Li, D.J., Shi, H.H., 2016. Microplastics in Taihu lake, China. Environ. Pollut. 216, 711e719. Sutton, N.B., Maphosa, F., Morillo, J.A., Abu Al-Soud, W., Langenhoff, A.A.M., Grotenhuis, T., Rijnaarts, H.H.M., Smidt, H., 2013. Impact of long-term diesel contamination on soil microbial community structure. Appl. Environ. Microbiol. 79 (2), 619e630. Van Boeckel, T.P., Brower, C., Gilbert, M., Grenfell, B.T., Levin, S.A., Robinson, T.P., Teillant, A., Laxminarayan, R., 2015. Global trends in antimicrobial use in food animals. Proc. Natl. Acad. Sci. U. S. A 112 (18), 5649e5654. Volkmann, H., Schwartz, T., Bischoff, P., Kirchen, S., Obst, U., 2004. Detection of clinically relevant antibiotic-resistance genes in municipal wastewater using real-time PCR (TaqMan). J. Microbiol. Methods 56 (2), 277e286. Wen, G., Koetzsch, S., Vital, M., Egli, T., Ma, J., 2015. BioMig-a method to evaluate the potential release of compounds from and the formation of biofilms on poly￾meric materials in contact with drinking water. Environ. Sci. Technol. 49 (19), 11659e11669. Wingender, J., Flemming, H.C., 2011. Biofilms in drinking water and their role as reservoir for pathogens. Int. J. Hyg Environ. Health 214 (6), 417e423. Xin, X.-F., Kvitko, B., He, S.Y., 2018. Pseudomonas syringae: what it takes to be a pathogen. Nat. Rev. Microbiol. 16 (5), 316e328. Yoshida, S., Hiraga, K., Takehana, T., Taniguchi, I., Yamaji, H., Maeda, Y., Toyohara, K., Miyamoto, K., Kimura, Y., Oda, K., 2016. A bacterium that degrades and as￾similates poly(ethylene terephthalate). Science 351 (6278), 1196e1199. Zettler, E.R., Mincer, T.J., Amaral-Zettler, L.A., 2013. Life in the "plastisphere": mi￾crobial communities on plastic marine debris. Environ. Sci. Technol. 47 (13), 7137e7146. Zhao, L., Hou, H., Zhou, Y., Xue, N., Li, H., Li, F., 2010. Distribution and ecological risk of polychlorinated biphenyls and organochlorine pesticides in surficial sedi￾ments from Haihe River and Haihe Estuary Area, China. Chemosphere 78 (10), 1285e1293. Zhou, J., Deng, Y., Luo, F., He, Z., Tu, Q., Zhi, X., 2010. Functional molecular ecological networks. mBio 1 (4). Zhu, Y.-G., Johnson, T.A., Su, J.-Q., Qiao, M., Guo, G.-X., Stedtfeld, R.D., Hashsham, S.A., Tiedje, J.M., 2013. Diverse and abundant antibiotic resistance genes in Chinese swine farms. Proc. Natl. Acad. Sci. U. S. A 110 (9), 3435e3440. 12 X. Wu et al. / Water Research 165 (2019) 114979