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内容丰富,以提问的形式,后含练习题及其参考大案。
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Diffusion of oxygen to the binuclear center studied by molecular dynamics simulations,此素材为mov格式,须QuickTime播放器播放。
关键字:CytochromeOxydase
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Necessary Background of Statistical Physics (2) when the velocity of the center of mass is fixed to zeroKinetic energy
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Molecular dynamics for continuous potentials Short history: The first MD simulation for a system interacting with a continuous potential (Lennard-Jones potential) was carried out by A. Rahman in1964. A. Rahman, Phys. Rev. 136, A405, (1964). Main differences between MD with continuous poentials and
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Monte Carlo Integration Hit and miss method:Algorithm: ( 1) generate N uniform random numbers, (i=1, 2,..., N), on(a,b) and N uniform random numbers, (i=1, 2,..., N), on (0,c); (2) calculate g() and count the number of cases, Nhit for whichg() (3)I can be estimated by
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How to analyse the errors of simulation results? Sustematic errors: Possible sources. 'poor equilibration; bad random number generator; 'system size effect. Practical method for detecting systematic errors: -longer simulation, different initial configurations; test random number generator, use different generators; simulation with larger systems
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Definitions What is Systems Engineering? the ensemble of coordinated analyses, simulations, and processes which lead to a technical product which best meets the needs of an identified customer What does it mean to manage systems engineering?
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